Skip to contents

Add date of death for individuals. Only death within the same observation period than `indexDate` will be observed.

Usage

addDeathDate(
  x,
  indexDate = "cohort_start_date",
  censorDate = NULL,
  window = c(0, Inf),
  deathDateName = "date_of_death",
  name = NULL
)

Arguments

x

Table with individuals in the cdm.

indexDate

Variable in x that contains the window origin.

censorDate

Name of a column to stop followup.

window

window to consider events over.

deathDateName

name of the new column to be added.

name

Name of the new table, if NULL a temporary table is returned.

Value

table x with the added column with death information added.

Examples

# \donttest{
cdm <- mockPatientProfiles()

cdm$cohort1 |>
  addDeathDate()
#> # Source:   table<og_091_1748639759> [?? x 5]
#> # Database: DuckDB v1.2.2 [unknown@Linux 6.11.0-1015-azure:R 4.5.0/:memory:]
#>    cohort_definition_id subject_id cohort_start_date cohort_end_date
#>                   <int>      <int> <date>            <date>         
#>  1                    2          9 1979-12-20        1983-10-29     
#>  2                    1          3 1995-07-27        1995-09-16     
#>  3                    1          2 1904-07-19        1916-04-16     
#>  4                    2          6 1985-09-30        1989-06-13     
#>  5                    2          4 1971-12-05        1986-10-03     
#>  6                    1          5 1928-03-31        1957-04-21     
#>  7                    1         10 1947-04-23        1948-11-03     
#>  8                    2          1 1975-01-17        1992-06-10     
#>  9                    1          7 1943-03-09        1961-03-01     
#> 10                    3          8 1976-04-10        1986-08-11     
#> # ℹ 1 more variable: date_of_death <date>

mockDisconnect(cdm = cdm)
# }