Changelog

Source: NEWS.md

PatientProfiles 1.3.0

CRAN release: 2025-02-26

• Changed addCategories by @KimLopezGuell in #734
• conceptSet allows conceptSetExpression by @catalamarti in #743
• account for integer64 counts by @catalamarti in #745
• add inObservation argument in addTable… by @catalamarti in #749
• addConceptIntersectField by @catalamarti in #747
• validate targetCohortId with og by @catalamarti in #750
• create filterInObservation by @catalamarti in #744
• create filterCohortId by @catalamarti in #748
• add benchmarkPatientProfiles by @catalamarti in #752
• Update addIntersect.R by @catalamarti in #758
• Reduce addDemographics computing time by @catalamarti in #759
• Reduce addIntersect computing time by @catalamarti in #761 #762 #764 #763
• preserve field type and add allowDuplicates arg by @catalamarti in #765
• Add weights argument to summariseResult by @nmercadeb in #733
• Increase test coverage by @catalamarti in #768

PatientProfiles 1.2.3

CRAN release: 2024-12-12

• Bug fix to correct NA columns when not in observation by @catalamarti

PatientProfiles 1.2.2

CRAN release: 2024-11-28

• Update links and codecoverage by @catalamarti
• Distinct individuals in addObservationPeriodId() by @martaalcalde
• Remove dependencies on visOmopResults and magrittr @catalamarti

PatientProfiles 1.2.1

CRAN release: 2024-10-25

• edge case where no concept in concept table by @edward-burn
• update assertions in addDeath functions by @catalamarti
• increase test coverage by @catalamarti
• add internal compute to addInObservation by @edward-burn
• conceptIntersect inObservation argument by @edward-burn

PatientProfiles 1.2.0

CRAN release: 2024-09-11

• addObservationPeriodId() is a new function that adds the number of observation period that an observation is in.

• Add density estimate to summariseResult()

PatientProfiles 1.1.1

CRAN release: 2024-07-28

• addCohortName overwrites if there already exists a cohort_name column #680 and #682.

• Correct nan and Inf for missing values #674

• Fix #670 #671

PatientProfiles 1.1.0

CRAN release: 2024-06-11

• addConceptIntersect now includes records with missing end date under the assumption that end date is equal to start date.

• add* functions have a new argument called name to decide if we want a resultant temp table (name = NULL) or have a permanent table with a certain name. Additional functions are provided, e.g. addDemographicsQuery, where the result is not computed.

PatientProfiles 1.0.0

CRAN release: 2024-05-16

• Stable release of package