Query to add the age of the individuals at a certain date
Source:R/addDemographicsQuery.R
addAgeQuery.Rd`r lifecycle::badge("experimental")` Same as `addAge()`, except query is not computed to a table.
Usage
addAgeQuery(
x,
indexDate = "cohort_start_date",
ageName = "age",
ageGroup = NULL,
ageMissingMonth = 1,
ageMissingDay = 1,
ageImposeMonth = FALSE,
ageImposeDay = FALSE,
missingAgeGroupValue = "None"
)Arguments
- x
Table with individuals in the cdm.
- indexDate
Variable in x that contains the date to compute the age.
- ageName
Name of the new column that contains age.
- ageGroup
List of age groups to be added.
- ageMissingMonth
Month of the year assigned to individuals with missing month of birth. By default: 1.
- ageMissingDay
day of the month assigned to individuals with missing day of birth. By default: 1.
- ageImposeMonth
Whether the month of the date of birth will be considered as missing for all the individuals.
- ageImposeDay
Whether the day of the date of birth will be considered as missing for all the individuals.
- missingAgeGroupValue
Value to include if missing age.
Examples
# \donttest{
library(PatientProfiles)
cdm <- mockPatientProfiles(source = "duckdb")
cdm$cohort1 |>
addAgeQuery()
#> # Source: SQL [?? x 5]
#> # Database: DuckDB 1.3.3-dev231 [unknown@Linux 6.11.0-1018-azure:R 4.5.1/:memory:]
#> cohort_definition_id subject_id cohort_start_date cohort_end_date age
#> <int> <int> <date> <date> <int>
#> 1 1 10 1917-06-03 1937-12-10 3
#> 2 2 6 1984-02-06 1987-03-02 10
#> 3 3 1 1931-04-29 1934-01-30 8
#> 4 1 3 1961-06-21 1962-05-08 44
#> 5 3 2 1958-12-05 1959-08-21 24
#> 6 2 4 1949-06-03 1957-07-27 0
#> 7 3 5 1966-05-15 1968-02-08 25
#> 8 2 8 1971-10-10 1971-11-08 42
#> 9 3 9 1995-07-20 1996-10-31 20
#> 10 2 7 1973-01-29 1986-06-15 14
# }