Plot summariseCohortTiming results.

Usage

plotCohortTiming(
  result,
  plotType = "boxplot",
  timeScale = "days",
  uniqueCombinations = TRUE,
  facet = c("cdm_name", "cohort_name_reference"),
  colour = c("cohort_name_comparator"),
  style = "default"
)

Arguments

result

A summarised_result object.

plotType

Type of desired formatted table, possibilities are "boxplot" and "densityplot".

timeScale

Time scale to show, it can be "days" or "years".

uniqueCombinations

Whether to restrict to unique reference and comparator comparisons.

facet

Columns to facet by. See options with availablePlotColumns(result). Formula is also allowed to specify rows and columns.

colour

Columns to color by. See options with availablePlotColumns(result).

style

Named list that specifies how to style the different parts of the table generated. It can either be a pre-defined style ("default" or "darwin" - the latter just for gt and flextable), NULL to get the table default style, or custom. Keep in mind that styling code is different for all table styles. To see the different styles see visOmopResults::tableStyle().

Value

A ggplot.

Examples

if (FALSE) { # \dontrun{
library(CohortCharacteristics)
library(omock)
library(DrugUtilisation)

cdm <- mockCdmFromDataset(datasetName = "GiBleed", source = "duckdb")

cdm <- generateIngredientCohortSet(
  cdm = cdm,
  name = "my_cohort",
  ingredient = c("acetaminophen", "morphine", "warfarin")
)

timings <- summariseCohortTiming(cdm$my_cohort)

plotCohortTiming(
  timings,
  timeScale = "years",
  uniqueCombinations = FALSE,
  facet = c("cdm_name", "cohort_name_reference"),
  colour = c("cohort_name_comparator")
)

plotCohortTiming(
  timings,
  plotType = "densityplot",
  timeScale = "years",
  uniqueCombinations = FALSE,
  facet = c("cdm_name", "cohort_name_reference"),
  colour = c("cohort_name_comparator")
)

cdmDisconnect(cdm = cdm)
} # }