Package index • ReportGenerator

All functions

autoCaptionCharac(): Generic to create automatic text paragraph for the caption for table from summarise_characteristics object.

dataCleanAttrition(): Clean attrition data

extractCSV(): `extractCSV()` iterates every file in the databaseFolders to `processCSV()`

generateMockData(): Creates a mock data set for ReportGenerator. The output is a zip folder for each database.

generateReport(): Generate report

getItemConfig(): Checks items available for ReportGenerator

getItemsList(): Checks items available for ReportGenerator

joinDatabases(): `joinDatabases()` joins several zip or csv folders into a list of dataframes.

loadFileData(): `loadFileData()` checks every csv their result type using columns or summarisedResult class as reference

processCSV(): `processCSV()` iterates every csv file and uses `loadFileData()` to check what type of result it is and adds it to a list

reportGenerator(): ReportGenerator Shiny App

table1aAutText(): Generates automatic text paragraph for Table 1

tableAttrition(): Generates automatic text paragraph for Table Incidence Attrition

unzipFiles(): `unzipFiles()` to a folder per database in a temporary directory for later use in `exctractCSV()`

variablesConfigAttrition(): `variablesConfigAttrition()` extracts to variablesConfig file the columns to identify Cohort Attrition

variablesConfigYaml(): Writes variablesConfig file in Yaml