It creates a mock database for testing DrugUtilisation package

Usage

mockDrugUtilisation(
  con = NULL,
  writeSchema = NULL,
  numberIndividuals = 10,
  seed = NULL,
  ...
)

Arguments

con: A DBIConnection object to a database. If NULL a new duckdb connection will be used.
writeSchema: A schema with writing permissions to copy there the cdm tables.
numberIndividuals: Number of individuals in the mock cdm.
seed: Seed for the random numbers. If NULL no seed is used.
...: Tables to use as basis to create the mock. If some tables are provided they will be used to construct the cdm object.

Value

A cdm reference with the mock tables

Examples

# \donttest{
library(DrugUtilisation)

cdm <- mockDrugUtilisation()
#> Warning: ! 7 column in condition_occurrence do not match expected column type:
#> • `stop_reason` is logical but expected character
#> • `provider_id` is logical but expected integer
#> • `visit_occurrence_id` is logical but expected integer
#> • `visit_detail_id` is logical but expected integer
#> • `condition_source_value` is logical but expected character
#> • `condition_source_concept_id` is logical but expected integer
#> • `condition_status_source_value` is logical but expected character
#> Warning: ! 3 column in concept do not match expected column type:
#> • `valid_start_date` is character but expected date
#> • `valid_end_date` is character but expected date
#> • `invalid_reason` is logical but expected character
#> Warning: ! 4 column in drug_strength do not match expected column type:
#> • `box_size` is logical but expected integer
#> • `valid_start_date` is character but expected date
#> • `valid_end_date` is character but expected date
#> • `invalid_reason` is logical but expected character

cdm
#> 
#> ── # OMOP CDM reference (duckdb) of DUS MOCK ───────────────────────────────────
#> • omop tables: person, observation_period, concept, concept_ancestor,
#> drug_strength, concept_relationship, drug_exposure, condition_occurrence,
#> observation, visit_occurrence
#> • cohort tables: cohort1, cohort2
#> • achilles tables: -
#> • other tables: -
# }