It creates a mock database for testing drugutilisation package

Usage

mockDrugUtilisation(
  connectionDetails = list(con = DBI::dbConnect(duckdb::duckdb(), ":memory:"),
    writeSchema = "main"),
  numberIndividuals = 10,
  seed = 1,
  concept = NULL,
  concept_ancestor = NULL,
  drug_strength = NULL,
  person = NULL,
  observation_period = NULL,
  drug_exposure = NULL,
  condition_occurrence = NULL,
  observation = NULL,
  concept_relationship = NULL,
  extraTables = list(),
  ...
)

Arguments

connectionDetails: Details of the connection
numberIndividuals: Number of individuals in the mock cdm
seed: Seed for the random numbers
concept: A concept tibble, if NULL a mock one is created
concept_ancestor: A concept_ancestor tibble, if NULL a mock one is created
drug_strength: A drug_strength tibble, if NULL a mock one is created
person: A person tibble, if NULL a mock one is created
observation_period: A observation_period tibble, if NULL a mock one is created
drug_exposure: A drug_exposure tibble, if NULL a mock one is created
condition_occurrence: A condition_occurrence tibble, if NULL a mock one is created
observation: A observation tibble, if NULL a mock one is created
concept_relationship: A concept_relationship tibble, if NULL a mock one is created.
extraTables: Extra tibbles to be instantiated that are not cohorts or cdm tables
...: Cohorts can be added to the cdm reference, cohort1 and cohort2 will be created if not provided

Value

A cdm reference with the mock tables

Examples

# \donttest{
library(DrugUtilisation)

cdm <- mockDrugUtilisation()

cdm
#> 
#> ── # OMOP CDM reference (duckdb) of DUS MOCK ───────────────────────────────────
#> • omop tables: person, observation_period, concept, concept_ancestor,
#> drug_strength, drug_exposure, condition_occurrence, visit_occurrence,
#> observation, concept_relationship
#> • cohort tables: cohort1, cohort2
#> • achilles tables: -
#> • other tables: -
# }